Prediction of anti-tumor chemical probes of a traditional Chinese medicine formula by HPLC fingerprinting combined with molecular docking

Eur J Med Chem. 2014 Aug 18:83:294-306. doi: 10.1016/j.ejmech.2014.06.037. Epub 2014 Jun 18.

Abstract

A traditional Chinese medicine formula (Fuzheng Yiliu decoction; FZYLD) has been used for many years in clinical settings to cure liver tumors; however, no empirical research has reported its chemical composition. In this paper, 21 chief constituents were distinguished from FZYLD using high-performance liquid chromatography-mass spectrometry fingerprint analysis. Molecular docking studies for B-cell lymphoma-extra large (Bcl-XL), interleukin (IL)-2, and tumor necrosis factor-α (TNF-α) were bound to evaluate their anticancer activities. 7 compounds showed potential Bcl-XL high affinity binding with a dissociate constant (Kd) < 10 μM; 7 compounds bound with IL-2 had a Kd < 10 μM; and 11 compounds showed potential TNF-α inhibition with a Kd < 10 μM. Moreover, 11 compounds showed better anticancer activity toward human HepG2 (hepatoma) cancer cell lines with IC50 values < 100 μM in vitro. The killings effects of natural killer cells can be activated by FZYLD on HepG2 cells and regulate the immune response through modulating IL-2 and TNF-α expression in vivo. In the "Fuzheng" Chinese medicine formula, many substances participate in the complex regulation of the immune network to execute the anti-tumor effect. The combination approach of chromatographic fingerprint and computer virtual docking used to explore active chemical matter of traditional Chinese medicine is extremely valuable.

Keywords: A traditional Chinese medicine formula; Anti-tumor chemical probes; HPLC fingerprint; Molecule docking.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / chemistry*
  • Antineoplastic Agents / metabolism
  • Antineoplastic Agents / pharmacology*
  • Cell Survival / drug effects
  • Chemistry, Pharmaceutical
  • Chromatography, High Pressure Liquid
  • Computational Biology*
  • Diosgenin / analysis
  • Drugs, Chinese Herbal / chemistry*
  • Drugs, Chinese Herbal / metabolism
  • Drugs, Chinese Herbal / pharmacology*
  • Hep G2 Cells
  • Humans
  • Interleukin-2 / chemistry
  • Interleukin-2 / metabolism
  • Killer Cells, Natural / drug effects
  • Killer Cells, Natural / immunology
  • Medicine, Chinese Traditional*
  • Molecular Docking Simulation*
  • Protein Conformation
  • Saponins / analysis
  • Triterpenes / analysis
  • Tumor Necrosis Factor-alpha / chemistry
  • Tumor Necrosis Factor-alpha / metabolism
  • bcl-X Protein / chemistry
  • bcl-X Protein / metabolism

Substances

  • Antineoplastic Agents
  • Drugs, Chinese Herbal
  • Interleukin-2
  • Saponins
  • Triterpenes
  • Tumor Necrosis Factor-alpha
  • bcl-X Protein
  • fuzheng yiliu
  • astragaloside A
  • Diosgenin